Publications

  1. Behera, V., Guzzetta, A., Giba, H., Pen, U.-Y., Lello, A.D., Pandey, B., Doran, B.A., Esposito, A., Pezeshk, A., Husain, A., et al. (2026). Pan-tumor spatial transcriptomics reveals conserved properties of tumor organization. CR Med 0. https://doi.org/10.1016/j.xcrm.2026.103013.

  2. Doran, B.A., Chen, R.Y., Giba, H., Behera, V., Barat, B., Sundararajan, A., Lin, H., Sidebottom, A., Pamer, E.G., and Raman, A.S. (2025). Subspecies phylogeny in the human gut revealed by co-evolutionary constraints across the bacterial kingdom. cels 0. https://doi.org/10.1016/j.cels.2024.12.008.

  3. Zheng, H.B., Doran, B.A., Kimler, K., Yu, A., Tkachev, V., Niederlova, V., Cribbin, K., Fleming, R., Bratrude, B., Betz, K., et al. (2023). Concerted changes in the pediatric single-cell intestinal ecosystem before and after anti-TNF blockade. Preprint, https://doi.org/10.7554/eLife.91792.1 https://doi.org/10.7554/eLife.91792.1.

  4. Kummerlowe, C., Mwakamui, S., Hughes, T.K., Mulugeta, N., Mudenda, V., Besa, E., Zyambo, K., Shay, J.E.S., Fleming, I., Vukovic, M., Doran, B.A., et al. (2022). Single-cell profiling of environmental enteropathy reveals signatures of epithelial remodeling and immune activation. Science Translational Medicine 14, eabi8633. https://doi.org/10.1126/scitranslmed.abi8633.

  5. Zhivaki, D., Borriello, F., Chow, O.A., Doran, B., Fleming, I., Theisen, D.J., Pallis, P., Shalek, A.K., Sokol, C.L., Zanoni, I., et al. (2020). Inflammasomes within Hyperactive Murine Dendritic Cells Stimulate Long-Lived T Cell-Mediated Anti-tumor Immunity. Cell Reports 33, 108381. https://doi.org/10.1016/j.celrep.2020.108381.

  6. Ziegler, C.G.K., Allon, S.J., Nyquist, S.K., Mbano, I.M., Miao, V.N., Tzouanas, C.N., Cao, Y., Yousif, A.S., Bals, J., Hauser, B.M., Doran B., et al. (2020). SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues. Cell 181, 1016-1035.e19. https://doi.org/10.1016/j.cell.2020.04.035.